Upload your OTU/ASV table

[For detailed information on how the files have to look, check out the Info & Settings tab on the left!]


Upload your MSD data directly into Namco


You can either upload a file with mulitple links from MSD and then choose one or paste a single link directly into the corresponding field.


If you choose to work with zOTUs, the phylogenetic tree has to be built first. This leads to longer upload times.

Upload fastq sequencing files

[For detailed information on how the files have to look, check out the Info & Settings tab on the left!]

For details on the sample-name cutoff feature, check out the sample-names explanation in the 'Info & Settings' tab!


It is highly advised to first check the sequencing quality of your reads in order to set the filterin parameters below correctly. Please hit this button to generate quality plots for each file.


Additional parameters:




Parameter information

Upload data from MSD

Explain MSD + link



Start by uploading your data or use our provided sample dataset and try out all the features in NAMCO


Overview of NAMCO

Documentation

Issues & Recommendations

Authors

References:

Data Overview & Filtering

Please consider filtering your data!

fastq Overview

Basic Analysis

Differential Analysis

Functional Analysis

Phylogenetic Analysis

Network Analysis

Confounding Analysis

Machine Learning

Information & global settings